CLI cleanup and documentation (#2244)

* CLI init refactor

* fix

* cleanup and (partial) docs

* Adding documentation and continuing cleanup (in progress)

* remove finetune.py script

* continued cleanup and documentation

* pytest fixes

* review comments

* fix

* Fix

* typing fixes

* make sure the batch dataset patcher for multipack is always loaded when handling datasets

* review comments

* fix

---------

Co-authored-by: Dan Saunders <dan@axolotl.ai>
Co-authored-by: Wing Lian <wing@axolotl.ai>

tests/e2e/patched/test_cli_integrations.py

@@ -5,7 +5,7 @@ from pathlib import Path
 
 import yaml
 
-from axolotl.cli import load_cfg
+from axolotl.cli.config import load_cfg
 from axolotl.utils.dict import DictDefault